Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAAEARVSRWY-------FGGLASCGAACC---THPLDLLKVHLQTQQEVKLRMTGMALRVVRTDGILALYSGLSASLCRQMTYSLTRFAIYETVRDRVAKGSQGPLPFHEKVLLGSVSGLAGGFVGTPADLVNVRMQNDVKLPQGQRRNYAHALDGLYRVAREEGLRRLFSGATMASSRGALVTVGQLSCYDQAKQLV------LSTGYLSDNIFTHFVASFIAGGCATFLCQPLDVLKTRLMNSK-GEYQGVFHCAVETAKLGPLAFYKGLVPAGI----RLIPHTVLTFVFLEQLRKNFGIKVPS |
| 1G8O Chain:A ((23-309)) | --SKLKLSDWFNPFKRPEVVTMTKWKAPVVWEGTYNRAVLDNYYAKQK-ITVGLTVFAVGRYIEHYLEEFLTSANKHFMVGHP---VIFYIMVDDVSRMPLIELGPLRSFKVFK-----------IKPEKRWQDISMMRMKTIGEHIVAHIQHEVDFLFCMDVDQVFQDKFGVETL----GESVAQLQAWWYKADPNDFTYERRKESAAYIPFGEGDFYYHAAIFGGTPTQVLNITQECFKGILKDKKNDIEAQWHDESHLNKYFLLNKPTKILSPEYCWDYHIGLPADIKLVKMSWQTKEYNVVRNN |
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General information:
TITO was launched using:
| RESULT:
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Template: 1G8O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -133680 for 2193 contacts (-61.0/contact) +
2D Compatibility (PS) -27451 + (NN) -26 + (LL) 960
1D Compatibility (HY) -14000 + (ID) 1800
Total energy: -175997.0 ( -80.25 by residue)
QMean score : 0.264
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