Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------MAATASAGAGGIDGKPRTSPKSVKFLFGGLAGMGATVFVQPLDLVKN-----RMQLSGEGAKTREYKTSFHALTSILKAEGLRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFLLKAVIGMTAGATGAFVGTPAEVALIRMTAD--GRLPADQRRGYKNVFNALIRITREEGVLTLWRGCIPTM------ARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPVDIAKTRIQNMRMI----DGKPEYKNGLDVLFKVV-------------RYEGFFSLWKGFTPYYARLGPHTVLTFIFLEQMNKAYKRLFLSG--------------------------------------------------------- |
| 3U0R Chain:A ((2-446)) | PTVEELYRNYGILADATEQVGQHKDAYQVILDGVKGGTKEKRLAAQFIPKFFKH-FPELADSAINAQLDLCEDEDVSIRRQAIKELPQFATGENLPRVADILTQLLQTDDSAEFNLVNNALLSIFKMDAKGTLGGLFSQILQGEDIVRERAIKFLSTKLKTLPDEVLTKEVEELILTESKKVLEDVTGEEFVLFMKILSGLKSLQTVSGRQQLVELVAEQADLEQTFNPSDPDCVDRLLQCTRQAVPLFSKNVHSTRFVTYFCEQVLPNLGTLTTPGL-DIQLEVLKLLAEMSSFCGDMEKLETNLRKLFDKLLEYMPLPPKLQFSYVECLLYSFHQLGRKLPDFLTAKAEKLKDFKIRLQYFARGLQVYIRQLRLALQGKTGEALKTEENKIKVVALKITNNINVLIKDLFPPSYKSTVTLSWKPV |
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General information:
TITO was launched using:
| RESULT:
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Template: 3U0R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -112713 for 2285 contacts (-49.3/contact) +
2D Compatibility (PS) -31680 + (NN) 1384 + (LL) 20
1D Compatibility (HY) -4400 + (ID) 1650
Total energy: -149039.0 ( -65.22 by residue)
QMean score : 0.216
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