Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------MALDFLAGCAGGVAGVLVGHPFDTVKVRLQVQS-------------VEKPQY---------RGTLHC-------FKSIIKQESVLGLYKGLGSPLMGLTFINALVFG---VQGNTLRALGHDSPLNQFLAGAAAGAIQCVICCPM----ELAKTRLQLQDAG-----------PARTYKGSLDCLAQIYGHEGLRGVNR-GMVSTLLRETPSFGVYFLTYDALTRALGCEPGDRLLVPKLLL-AGGTSGIVSWLSTYPVDVVKSRLQADGLRGAPRYR-------GILDCVHQSYRAEGWRVFTRGL---------------ASTLLRAFPVN------AATFAT------VTVVLTY------ARGEEAG-----------------------------PEGEAVPAAPAGPALAQPSSL---------- |
| 4Z0V Chain:A ((7-440)) | PPAFTELQLPRYIMAGFPVCPKLSLEFGDPASSLFRWYKEAKPGAAGSSWTETDVEERVYTPSNADIGLRLKLHCTPGDGQRFGHSRELESVCVVEAGPGT----CTFDHRHLYTKKVTEDALIRTVSYNILADTYAQTEFSRTVLYPYCAPYALELDYRQNLIQKELTGYNADVICLQEVDRAVFSDSLVPALEAFGLEGVFRIKQHEGLATFYRK-SKFSLLSQHDISFYEALESDPLHKELLEKLVLYPSAQEKVLQRSSVLQVSVLQSTKDSSKRICVANTHLYWHPKGGYIRLIQMAVALAHIRHVSCDLYPGIPVIFCGDFNSTPSTGMYHFVINGSIPEDHEDWASNGEEERCNMSLTHFFKLKSACGEPAYTNYVGGFHGCLDYIFIDLNALEVEQVIPLPSHEEVTTHQALPSVSHPSDHIALVCDLKWK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Z0V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -107721 for 2097 contacts (-51.4/contact) +
2D Compatibility (PS) -31517 + (NN) -8529 + (LL) 124
1D Compatibility (HY) -12800 + (ID) 3200
Total energy: -163643.0 ( -78.04 by residue)
QMean score : 0.221
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