Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MADQPKPISPLKNLLAGGFGGVCLVFVGHPLDTVKVRLQTQPPSLPGQPPMYSGTFDCFRKTLFREGITGLYRGMAAPIIGVTPMFAVCFFGFG-LGKKLQQKHPEDVLSYPQLFAAGMLSGVFTTGIMTPGERIKCLLQIQASSGESKYTGTLDCAKKLYQEFGIRGIYKGTVLTLMRDVPASGMYFMTYEWLKNIFTPE-GKRVSELSAPRILVAGGIAGIFNWAVAIPPDVLKSRFQTAPPGKYPNGFRDVLRELIRDEGVTSLYKGFNAVMIRAFPA-NAACFLGFEVAMKFL---NWATPNL |
| 4KXR Chain:C ((8-298)) | -TDITVNVDGFWMLQALL-----------DIRHVAPELRCRPYVHPGMAVMREQGI--VVNDAVNEQVAARMKVLAAPDLEVVALLSRGKLLYGVIDDENQPPGSRDIPDNEFRVVLARRGQHWVSAVRV-GNDIT-VDDVTVSDSASIAALVMDGLESIH--------HADPAAINAVNVPMEEMLEATKSWQESGFNVFSGGDLRRMGISAATVAALGQALSDPAAEVAVYARQYRDDAKGPSASVLSLKDG------SGGRIALYQQAREAWLAICPATPQLVQVGVKTVLDTLPYGEWKTHS- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KXR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -125969 for 2144 contacts (-58.8/contact) +
2D Compatibility (PS) -27812 + (NN) 447 + (LL) 2260
1D Compatibility (HY) -800 + (ID) 2200
Total energy: -154074.0 ( -71.86 by residue)
QMean score : 0.223
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