Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQTKGGQTWARRALLLG-----ILWATAHLPLSGTSLPQRLPRATGNSTQCVISP-----SSEFPEGFFTRQERRDGGIIIYFLIIVYMFMAISI---VCDEY------------------------------FLPSLEIISESLGLSQDVAGTTFMAA-----GSSAPEL------VTAFLGVFITKGDIGISTILG---SAIYNLLGIC--AAC-GLLSNTVSTLSCWPLF--------------RDCAAYTISAAAVL---GIIYDNQVY-----WYEGALLLLIYGLYVLVLCFDI--KINQYIIKKCSPCCACLAKAMER-SEQQPLMGWEDEGQPFIRRQSRTDSGIFYEDSGYSQLSISLHGLSQVSEDPP-SVFNMPEADLKRIFWVLSLPIITLLFLTTPDCRKKFWKNYFVIT---FFMSAIWISAFT-----YILVWMVTIT---GETLEIPDTVMGLTLLAAG----TSIPDTIASVLVARKGKGDMAMSNIV----GSNVFDMLCL-------GIPWFIKTAFINGSAPAE---VNSRGLTYITISLNISIIFL------FLAVHFNGWKLDRKLG--------------------IVCLLSYLGLATLSVLYEL------GIIGNNK---------------IRGCGG----------------------------------------- |
| 3W5F Chain:A ((3-708)) | -EAEFSVSYDDRAIIINGKRKILISGSIHYPRSTPQMWPDLIQKAKDGGLDVIETYVFWNGHEPSPGKYNFEGRYDLVRFIKMVQRAGLYVNLRIGPYVCAEWNFGGFPVWLKYVPGMEFRTNNQPFKVAMQGFVQKIVNMMKSENLFESQGGPIIMAQIENEYGPVEWEIGAPGKAYTKWAAQMAVGLKTGVPWIMCKQEDAPDPVIDTCNGFYCEGFRPNKPYKPKMWTEVWTGWYTKFGGPIPQRPAEDIAFSVARFVQNNGSFFNYYMYHGGTNFGRTSSGLFIATSYDYDAPLDEYGLLNEPKYGHLRDLHKAIKLSEPALVSSYAAVTSLGSNQEAHVYRSKSGACAAFLSNYDSRYSVKVTFQNRPYNLPPWSISILPDCK-TAVYNTAQVNSQSSSIKMTPAGGGLSWQSYNEETPTALTANGLWEQKNVTRDSSDYLWYMTNVNIASNEGFLKNGKDPYLTVMSAGHVLHVFVNGKLSGTVYGTLDNPKLTYSGNVKLRAGINKISLLSVSVGLPNVGVHYDTWNAGVLGPVTLSGLNEGSRNLAKQKWSYKVGLKGESLSLHSLSGSSSVEWVRGSLMAQKQPLTWYKATFNAPGGNDPLALDMASMGKGQIWINGEGVGRHWPGYIAQGDCSKCSYAGTFNEKKCQTNCGQPSQRWYHVPRSWLKPSGNLLVVFEEWGGNPTGISLVRRSRS |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3W5F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -336877 for 3569 contacts (-94.4/contact) +
2D Compatibility (PS) -51284 + (NN) 7203 + (LL) 384
1D Compatibility (HY) -9600 + (ID) 4200
Total energy: -394374.0 ( -110.50 by residue)
QMean score : 0.067
|
|
|