Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSVRTLPLLFLNLGGEMLYILDQRLRAQNIPGDKARKDEWTEVDRKRVLNDIISTMFNRKFMEELFKPQELYSKKALRTVYERLAHASIMKLNQASMDKLYDLMTMAFKYQVLL---CPRPKDVLLVTFNH-LDTIKGFIRDSPT------ILQQVDETLRQLTEIYGGLSAGEFQ-LIRQTLLIFFQDLHIRVSMFLKDKVQNNNGRFVL---PVSGPVP----WGTEVP-GLIRMFNNKG------EEVKRIEFKHGGNYVPAPKEGSFELYGDRVLKLGTNMYSVNQPVETHVSGSSKNLASWTQESIAPNPLAKEELNFLARLMGGMEIK---------KPSGPEPGFRLN----------LFTTDEEEEQAALTRPEELSYE-VINIQATQDQQRSEELARIMGEFEITEQPRLSTSKGDDLLAMMDEL------- |
| 4OFZ Chain:A ((85-513)) | QTVDDFKNLMYKMQETRRAIVFALLNEKDLT--------KDDVEILKRAYEKLTDNFQREMCTLTTKLSVNIGDETRGLEKDLKYLDALMNIRREEPNLLWPIIMSRVDLFSILANYHPKGKETFLKEYEDTVKFLKTFISSEAITGKKPIFITDWDGTMKD----YCSQYATNLQPVYSAVGMTRFAASFTRISAVLTAGPLRGPGILDLTAMPIDGPVMFSGSWGREWWLSGKRVVHQDGITDEGFNALQRLDDEMKDLLHTSP----FALVGSGVQR---KVDRLTLGVQTVCHHVTSELSNRYQMAVKERMHNSQILVFDPSTELEVEVVAHNSGIIWNKGNGVERLIKSLGDSLQSPGKILICGDTLSDIPMVRQAVKQNPDGVLAIFVGAKMSLREEVKQVIGD----ESRCCFVSCPDVIHAAMSQILNEHCIG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OFZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -26026 for 2817 contacts (-9.2/contact) +
2D Compatibility (PS) -38828 + (NN) -10552 + (LL) 1204
1D Compatibility (HY) -15200 + (ID) 3250
Total energy: -92652.0 ( -32.89 by residue)
QMean score : 0.168
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