Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQPPPDEARRDMAGDTQWSRPECQAWTGTLLLGTCLLYCARSSMPICTVSMSQDFGWNKKEAGIVLSSFFWGYCLTQVVGGHLGDRIGGEKVILLSASAWGSITAVTPLLAHLSSAHLAFMTFSRILMGLLQ-GVYFPALTSLLSQKVRE-SERAFTYSIVGAGSQFGTLLTGAVGSLLLEWYGWQSIFYFSGGLTLLWVWYVYRYLLSEKDLILALGVLAQSRPVSRHNRVPWRRLFRKPAVWAAVVSQLSAACSFFILLSWLPTFFEETFPDAKGWIFNVVPWLVAIPASLFSGFLSDHLINQGYRAITVRKLMQGMGLGLSSVFALCLGHTSSFCESVVFASASIGLQTFNHSGISVNIQDLAPSCAGFLFGVANTAGALAGVVGVCLGGYLMETTGSWTCLFNLVAIISNLGLCTFLVFGQAQRVDLSSTHEDL--- |
2CY7 Chain:A ((5-377)) | -TLTYDTLRFAEFED-----------------------FPETSEPVWILGRKYSIFTEKDEILSDVASRLWFTYRKNF------PAIGGTG--PTSDTGWGCMLRCGQMIFAQALVCRHLGRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIG------------QWYGPNTVAQVLKKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRTSVPCS--PWR------------------------------------------------PLVLLIPLRL-----GLTDINEAYVETLKHCFMMPQSLG-------VIGGKPNSA-HYFIGYVGEELIYLDPHTTQPAVEGCFIPDESFHCQHPPCRMSIAELDPSIAVGFFCKTEDDFNDWCQQVKKLSLLPMFELVEQ-QPDVLNLSLDSSDVERL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CY7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -247531 for 2688 contacts (-92.1/contact) +
2D Compatibility (PS) -33265 + (NN) -1618 + (LL) 8816
1D Compatibility (HY) -10400 + (ID) 2900
Total energy: -286898.0 ( -106.73 by residue)
QMean score : 0.243
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