Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPSFDEALQRVGEFGRFQRRVFLLLCLTGVTFAFLFVGVVFLGTQPDHYWCRGPSAAALAERCGWSPEEEWNRTAPASRGPEPPERRGRCQRYLLEAANDSASATSALSCADPLAAFPNRSAPLVPCRGGWRYAQAHSTIVSEFDLVCVNAWMLDLTQAILNLGFLTGAFTLGYAADRYGRIVIYLLSCLGVGVTGVVVAFAPNFPVFVIFRFLQGVFGKGTWMTCYVIVTEIVGSKQRRIVGIVIQMFFTLGIIILPGIAYFIP--NWQGIQLAITLPSFLFLLYYWVVPESPRWLITRKKGDKALQILRRIAKCNGKYLSSNYSEITVTDEEVSNPSFLDLVRTPQMRKCTLILMFAWFTSAVVYQGLVMRLGIIGGNLYIDFFISGVVELPGALLILLTIERLGR--RLPFAASNIVAGVACLVTAFL--PEGIAWLRTTVATLGRLGITMAFEIVYLVNSELYPTTLRNFGVSLCSGLCDFGGIIAPFLLFRLAAVWLELPLIIFGILASICGGLVMLLPETKGIALPETVDDVEKLGSPHSCKCGRNKKTPVSRSHL |
4QIQ Chain:A ((7-470)) | ---------------SYIFSITLVATLGGLLFGYDTA--VISGT-----------------------VESLNTVFVAPQNLSESAANSLLGFCV-------ASALIGCIIGGALGGYCSNR---------FGRRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGY----VPEFVIYRI------IGGIGVGLASMLSPMYIAELAP-----------AHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDASWLNTDGWRYMFASECIPALLFLMLLYTVPESPRWLMT-----LATQAVQEIKHSLDRLLMFGVGVIVIGVMLSIFQQFVGI-------NVVLYYAPEVFKT----------LGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWG-PVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTL----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QIQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -372029 for 3578 contacts (-104.0/contact) +
2D Compatibility (PS) -42632 + (NN) 8930 + (LL) 5296
1D Compatibility (HY) -27600 + (ID) 4300
Total energy: -432335.0 ( -120.83 by residue)
QMean score : 0.146
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