Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------------METVPPAVDLVLGASAC---------CLACVFTNPLEVVKTRLQLQGELQARGTYPRPYHGFIASVAAVARADGLWGLQKGLAAGLLYQGLMNGVRFYCYSLACQAGLTQQPGGTVVAGAVAGALGAFVGSPAYLIKTQLQAQTVAAVAVGHQHNHQTVLGALETIWRQQGLLGLWQGVGGAVPRVMVGSAAQLATFASAKAWVQKQQWLPEDSWLVALAGGMISSIAVVVVMTPFDVVSTRLYNQPVDTAG--RGQLYGGLTDCMVKIWRQEGPLALYKGLGPAYLRLGPHTILSMLFWDELRKLAGRAQHKGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
| 3J2P Chain:A ((1-495)) | MRCIGISNRDFVEGVSGGSWVDIVLEHGSCVTTMAKNKPTLDFELIETEAKQPATLRKYCIEAKLTN--TTTDSRCPTQGEPSLNEEQDKR---FVCKHSMVDRG---WGNGCGLFGK---GGIVTCAMFTC---------KKNMKGKVVQPE----------NLEYTIVITPHSGEEHAVGNDTGKHGKEIKITPQSSITEAELTGYGTVTMECSPRTGLDFNEMVLLQMENKAWLVHRQWFLDLP-LPWLPGADTQGSNWIQKETLVTFKNPHAKKQDVVVLGSQEGAMHTALTG-ATEIQMSSGNL-LFTGHLKCRLRMDKLQLKGMSYSMCTGKFKVVKEIAETQHGTIVIRVQYEGDGSPCKIPFEIMDLEKRHVLGRLITVNPIVTEKDSPVNIEAEPPFGDSYIIIGVEPGQLKLNWFKKGSSIGQMIETTMRGAKRMAILGDTAWDFGSLGGVFTSIGKALHQVFGAIYGAAFSGVSWIMKILIGVIITWIGMNSRSTSLSVSLVLVGVVTLYLGVMVQA |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3J2P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -111741 for 1829 contacts (-61.1/contact) +
2D Compatibility (PS) -27179 + (NN) 9876 + (LL) 2044
1D Compatibility (HY) -1200 + (ID) 2850
Total energy: -131050.0 ( -71.65 by residue)
QMean score : 0.049
|
|
|