Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIEPFGNQYIVARPVYSTNAFEENHKKTGRHHKTFLDHLKVCCSCSPQKAKRIVLSLFPIASWLPAYRLKEWLLSDIVSGISTGIVAVLQGLAFALLVDIPPVYGLYASFFPAIIYLFFGTSRHISVGPFPILSMMVGLAVSGAVSKAVPDRNAT--TLGLPNNSNNSSLLDDERVRVAAAASVTVL----SGIIQLAFGILRIGFVVIYLSESLISGFTTAAAVHVLVSQLKFIFQLTVPSHTDPVSIFKVLYSVFSQIEKTNIADLVTALIVLLVVSIVKEINQRFKDKLPVPIPIEFIMTVIAAGVSYGCDFKNRFKVAVVGDMNPGFQPPITPDVETFQNTVGDCFGIAMVAFAVAFSVASVYSLKYDYP-LDGNQELIALGLGNIVCGVFRGFAGSTALSRSAVQESTGGKTQIAGLI--GAIIVLIVVLAIGFLLAPLQKSVLAALALGNLKGMLMQFAEIGRLWRKDKYDCLIWIMTFIFTIVLGLGLGLAASVAFQLLTIVFRTQFPKCSTLANIGRTNIYKNKKDYYDMYEPEGVKIFRCPSPIYFANIGFFRRKLIDAVGFSPLRILRKRNKALRKIRKLQKQGLLQVTPKGFICTVDTIKDSDEELDNNQIEVLDQ--PINTTDLPFHIDWNDDLPLNIEVPKISLHSLILDFSAVSFLDVSSVRGLKSILQEFIRIKVDVYIVGTDDDFIEKLNRYEFFDGEVKSSIFFLTIHDAVLHILMKKDYSTSKFNPSQEKDGKIDFTINTNGGLRNRVYEVPVETKF |
| 2GMH Chain:A ((4-584)) | ----------CKVPRITTHYTIYPRDQDKRWEGVNMERFAEEAD--------VVIVGAGPAGLSAATRLKQLAAQH------------EKDLRVCLVEKAAHIGA------------------HTLSG---------ACLDPRAFEELFPDWKEKGAPLNTPVTEDRFGILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDG-----------APKTTFERGLELHAKVTIFAEGCHGHLAKQLYKKFDLRANCEPQTYGIGLKELWVIDEKKWKPGRVDHTV--GW--PLDR------HTYGGSFLYHLNEGEPLLALGFVVGLDYQNPYLSPFREFQRWKHHPSIKPTLEG---GKRIAYGARALNEGGFQSIPKLTFPGGLLIGC---SPGFMNVPKIK-----------------------------------------------GTHTAMKSGTLAAESIFNQLTSENLQSKTIG-LHVTEYEDNLKNSWVWKELYSVRNIRPSCHGILGVYGGMIYTGIFYWIFRGMEPWTLKHKGSDSDQLKPAKDCTPIEY-------PKPDGQISFDLLSSVALSGTNHEHDQPAHLTLKDD----------------------SVPVNRNLSIYDGPEQRFCPAGV-----------------YEFVPLEQGDGFRLQINAQNCVHC-----KTCDIKDPSQN----INWVVPEGGGG-------PAYNGM |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GMH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -377125 for 5202 contacts (-72.5/contact) +
2D Compatibility (PS) -59001 + (NN) -5135 + (LL) 16076
1D Compatibility (HY) -2800 + (ID) 4550
Total energy: -432535.0 ( -83.15 by residue)
QMean score : 0.125
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