Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGIFPGIILIFLRVKFATAAVIVSGHQKSTTVSHEMSGLNWKPFVYGGLASIVAEFGTFPVDLTKTRLQVQGQSIDARFKEIKYR-GMFHALFRICKEEGVLALYSGIAPALLRQASYGTIKIGIYQSLKRLFVERLEDETLLINMICGVVSGVISSTIANPTDVLKIRMQAQGSLFQGSMIGSFIDIYQQEGTRGLWRGVVPTAQRAA-----------IVVGVELPVYDITKKHLILSGMMGDTILTHFVSSFTCGLAGALASNPVDVVRTRMMNQRAIVGHVDLYKGTVDGILKMWKHEG---FFALYKGFWPNWLRLGPWNIIFFITYEQLKRLQI---------------- |
| 2IVN Chain:A ((1-325)) | M-----LALGIEGTAHTLGIGIVSEDKVLANVFDTLTTE------KGG---------IHPKEAAEHHARLMKPLLRKALSEAGVSLDDIDVIAFSQGPGLGPALRVVATAARALAVKYRKPIVGVNHCIAHVEITKMFGVK---DPVGLYVSGGNTQVLALEGG----RYRVFGETLDIG-IGNAIDVFAREL--GLGFPGGPKVEKLAEKGEKYIELPYAVKGMDLS-FSGLLTEAIRKYRSGKYRVEDLAYSFQETAFAALVEVTERAVAHTEKDEVVLVGGVAANNRLREMLRIMTEDRGIKFFVPPYDLCRDNGAMIAYTGLRMYKAGISFRLEETIVKQKFRTDEVEIVWH |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IVN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -226477 for 2650 contacts (-85.5/contact) +
2D Compatibility (PS) -30613 + (NN) 4288 + (LL) 2816
1D Compatibility (HY) 3200 + (ID) 2400
Total energy: -249186.0 ( -94.03 by residue)
QMean score : 0.258
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