Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGTIHLFRKPQRSFFGKLLREFRLVAADRRSWKILLFGVINLICTGFLLMWCSSTNSIALTAYTYLTIFDLFSLMTCLISYWVTLRKPSPVYSFGFERLEVLAVFASTVLAQLGALFILKESAERFLEQPEIHTGRLLVGTFVALCFNLFTMLSIRNKPFAYVSEAASTSWLQEHVADLSRSLCGIIPGLSSIFLPRMNPFVLIDLAGAFALCITYMLIEINNYFAVDTASAIAIALMTFGTMYPMSVYSGKVLLQTTPPHVIGQLDKLIREVSTLDGVLEVRNEHFWTLGFGSLAGSVHVRIRRDANEQMVLAHVTNRLYTLVSTLTVQIFKDDWIRPALLSGPVAANVLNFSDHHVIPMPLLKGTDDLNPVTSTPAKPSSPPPEFSFNTPGKNVNPVILLNTQTRPYGFGLNHGHTPYSSMLNQGLGVPGIGATQGLRTGFTNIPSRYGTNNRIGQPRP |
1W5C Chain:D ((1-350)) | -MTIAIGRAPAERGWFDILDDWLKRD--------------RFVFVGWSGILLFPCAYLALGGWLTGTTFV--------TSWYTHGLASSYLEGCNFLTVAV-----STPANSMGHSLLLLWGPEAQGDFTRWCQLG---GLWTFIALHGAFGLIGFMLRQFEIARLVG-----------------------------VRPYNAIAFSAPIAVFVSVFLIYPLGQSSWFFAPSFGVA----AIFRFLLFFQGFHNWTLNPFHMMGVAGVLGGALLCAIHGATVENTLFQDGEGASTFRAFNPTQAEETYSMVTANRFWSQIFGIAFS------NKRWLHFFMLFVPVTG--LWMSAIGVVGLALNLRSYDFISQEIRAAEDPEFETFYTKNLLLNEGIRAWMAPQDQPHENFVFPEEVLPRGN--------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1W5C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -96203 for 2430 contacts (-39.6/contact) +
2D Compatibility (PS) -34695 + (NN) 5019 + (LL) 7860
1D Compatibility (HY) -10800 + (ID) 2500
Total energy: -131319.0 ( -54.04 by residue)
QMean score : 0.014
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