Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLTVEVEVKITADDENKAEEIVKRVID-EVEREVQKQYPNATITRTLTRDDGTVELRIKVKADTEEKAKSIIKLIEERIEEELRKRDPNATITRTVRTEVGSSWSLEHHHHHH
1VEH Chain:A ((11-82))
--------------DDEVVAMIKELLDTRIRPTVQEDGGDVIYRGF---EDGIVRLKLQGSCTSC---PSSIITLKSGIQNMLQFYIPEVEG---------------------
General information:
TITO was launched using:
RESULT:
Template:
1VEH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1786 for 435 contacts (-4.1/contact) +
2D Compatibility (PS) -7667 + (NN) -3288 + (LL) 3460
1D Compatibility (HY) -3600 + (ID) 650
Total energy: -13531.0 ( -31.11 by residue)
QMean score : 0.404
(partial model without unconserved sides chains):
PDB file :
Tito_1VEH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1VEH-query.scw
PDB file :
Tito_Scwrl_1VEH.pdb
: