Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKRLLTVAAFALAGCVTVVAQDKKKEFKMPTGYAGITHEMSEFYEPVPPVVTPGTDLKGGGFTAPSDAIVLFDGKDLSAWESVKGG-AAEWDVHDGVFTVNKK-KGDIQTKQKFNDFQMHIEWQVPTNITGESQSRGNSGIFLQG------------MYEVQVLDCYNNP---------TYVNGQTGSIYKQSIPLANAMRKPGEWNVYDIIYTAPTFKEDGSYRTHPTVTVIQNGVVLQNHTT-------ILGTTEWIGFPQVKKHGAGPIILQSHGDPSEPISFRNIWIREL |
| 3U1X Chain:A ((15-235)) | --------------------------------------------------------------EEKAEGYTLLFNGKDFTGWKMFNGGDVKGWQVEDGVIVGYGNVSTDIVTVKNYHNFQIKWDWKIGA--------QGNSGFLYHVQEGPKYKAPFETGPEYQLIDDDNYPWVSETGKEGLEDWQKTGCNYAMYVPETKQVNPPGEWNSSMVLYKD------------GYVEHWLNGEKLFSFQEGSEDWKMRRYSGKWEAFPDYGISTTGKLCFQDHGS---KVYFKNVKIKDL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3U1X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 18663 for 1553 contacts (12.0/contact) +
2D Compatibility (PS) -18868 + (NN) -2705 + (LL) 3920
1D Compatibility (HY) -9600 + (ID) 2650
Total energy: -11240.0 ( -7.24 by residue)
QMean score : 0.323
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