Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDTQQLYFLNDIGKQKPESIRNRSAACPFCD---RENLTDILATEGSIIWLKNKFPTLKDTFQTVLIETDNCEDHIATYTEEHMRSLIRFSIKHWLNLQKNEEFTSVILYKNHGPFSGGSLHHAHMQIIGMKYVNYLDNVEQDNFQGVIVQKNEHIELNISDRPIIGFTEFNIIIEDIGCIDELANYIQQTVRYILTDFHKGCSSYNLFFYYLNEKIICKVVPRFVVSPLYVGYKIPQVSTKIEDVKIQLAAYFTKQNDAIIHKKIE |
3LB5 Chain:A ((27-135)) | -----------------------DNNNIFAKLIRNEIPSVRVYEDDDVIAFMDIMPQAP--GHTLVI-PKKGSRNLLDADTETLFPVIKAVQKIAKAVKKAFQADGITVMQFNEAASQQTVYHLHFHIIPRMEGI------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LB5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -62193 for 728 contacts (-85.4/contact) +
2D Compatibility (PS) -11405 + (NN) -5679 + (LL) 12032
1D Compatibility (HY) -800 + (ID) 750
Total energy: -68795.0 ( -94.50 by residue)
QMean score : 0.187
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