Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
1ENV Chain:A ((18-153))
-----------------NEIARIKKLIGEARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARILAVERYLK---------------------------------------WMEWDREINNYTSLIHSLIEESQNQQEKNEQELLELD
General information:
TITO was launched using:
RESULT:
Template:
1ENV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3939 for 446 contacts (8.8/contact) +
2D Compatibility (PS) -10704 + (NN) -5392 + (LL) 2664
1D Compatibility (HY) -10800 + (ID) 3500
Total energy: -23793.0 ( -53.35 by residue)
QMean score : 0.176
(partial model without unconserved sides chains):
PDB file :
Tito_1ENV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ENV-query.scw
PDB file :
Tito_Scwrl_1ENV.pdb
: