Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | QDTFIAAVYEHAAILPNATLTPVSREEALALMNRNLDILEGAITSAADQGAHIIVTPEDAIYGWNFNRDSLYPYLEDIPDPEVNWIPCNNRNRFGQTPVQERLSCLAKNN------SIYVVANIGDKKPCDTSDPQCPPDGRYQYNTDVVFDSQGKLVARYHKQNLFM----GENQFNVPKEPEIVTFNTTFGSFGIFTCFDILFHD-PAVTLVKDFHVDTIVFPTAWMNVLPH-LSAVEFHSAWAMGMRVNFLASNIHYP--SKKM-TGSGIYAPNSSRAFHYDMKTEEGKLLLSQLDSHPSHSAVVNWTSYASSIEALSSGNKEFKGTVFFDEFTFVKLTGVAGNYTVCQKDLCCHLSYKMSENIPNEVYALGAFDGLHTVEGRYYLQICTLLKCKTTNLNTCGDSAETASTRFEMFSLSGTFGTQYVFPEVLLSENQLAPGEFQVSTDGRLFSLKPTSGPVLTVTLFGRLYEKDWASNASSG |
| 3N05 Chain:A ((19-261)) | -------------------------------IAGNAEAILRWTRHSAEQGAHLVAFPEMALTGYPV---------EDLAL---------RS-SF-VEASRTALRELAARLAEEGFGELPVLVGYLDRSESA-QPKYGQPAGA-PRNAAAVLH-RGRVALTFAKHHLPNYGVFDEFRYFVPGD-TMPIVRLHGVDIALAICEDLWQDGGRVPAA-RSAGAGLLLSVNASPYERDKDDTRLELVRKRAQEAGCTTAYLAMIGGQDELVFDGDSIVVDRDGEVVARAPQF-S-EGCVVLDLDLP---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3N05.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -100824 for 1834 contacts (-55.0/contact) +
2D Compatibility (PS) -24355 + (NN) -9057 + (LL) 13940
1D Compatibility (HY) -1200 + (ID) 1800
Total energy: -123296.0 ( -67.23 by residue)
QMean score : 0.180
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