Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------MIFLAILDLKSLVLNAINYWGPKNNNGIQGGDFG-YPISEKQID---TSIITSTHPRLIPHDLTIPQNLETIFTTTQVLTNNTDLQQSQTVSFAKKTTTTTSTSTTNGWTEGGKISDTLEEKVSVSIPFIGEGGGKNSTTIEANFAHNSSTTTFQQASTDIEWNISQPVLVPPRKQVVATLVIMGGNFTIPMDLMTTIDSTEHYSGYPILTWISSPDNSYNGPFMSWYFANWPNLPSG---FGPLNSDNTVTY---TGSVVSQVS---------------AGVYATVRFDQYDIHNLRTIEKTWYARHATLHNGKKISINN------VTEMAPTS--PIKTN---------------- |
| 1X9Y Chain:A ((41-397)) | KQLEINVKSDKVPQKVKDLAQQQFAGYAKALDKQSNAKTGKYELGEAFKIYKFNGEEDNSYYYPVIKD--GKI--------VYTLTLSPKNKDDLNKSKEDMNYSVKISNFIAKDLDQIKDKN----SNITVLTDEK---GFYFEEDG--KVRLVKATPLANNIKEKESAKTVSPQLKQELKTTVTPTKVQYENTLK--------NFKIREQQFDNSWCAGFSMAALLNATKNTDTYNAHDIMRTLYPEVSEQDLPNCATFPNQMIEYGKSQGRDIHYQEGVPSYNQVDQLTKDNVGIMILAQSVSQNPNDPHLGHALAVVGNAKINDQEKLIYWNPWDTELSIQDADSSLLHLSFNRDYNWYGSMIGYLEVP |
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General information:
TITO was launched using:
| RESULT:
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Template: 1X9Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 15857 for 2038 contacts (7.8/contact) +
2D Compatibility (PS) -29483 + (NN) -6600 + (LL) 948
1D Compatibility (HY) 2400 + (ID) 1700
Total energy: -18578.0 ( -9.12 by residue)
QMean score : 0.227
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