Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDLPDIVNMYFDADSCNDTDALSETFAPDAVVEDE--GARHQGVVAILRWWVAAKKAASYVAEPL-ESTVDGDKALVRAKVSGRFPGSPVTLT--YSFTI-KDGRIARLEIQ
1OHP Chain:A ((8-114))
---TAVVQRYVAALNAGDLDGIVALFADDATVENPVGSEPRSGTAAIREFYANSLKL-PLAVELTQEVRAVANEAAFAFIVSFEYQGRKTVVAPIDHFRFNGAGKVVSMRA-
General information:
TITO was launched using:
RESULT:
Template:
1OHP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32579 for 661 contacts (-49.3/contact) +
2D Compatibility (PS) -10911 + (NN) -3231 + (LL) 572
1D Compatibility (HY) -2000 + (ID) 1150
Total energy: -49299.0 ( -74.58 by residue)
QMean score : 0.449
(partial model without unconserved sides chains):
PDB file :
Tito_1OHP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OHP-query.scw
PDB file :
Tito_Scwrl_1OHP.pdb
: