Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGPVAGNYVHDFTANGTSSSFYTIAGNLSTSKGTATYNGKTLTQCLKMETATSISFT---APSAGKLTLVFA--EA------AA--TAKVDGNKVT-----ASNG-------IITVDLAQGAHTITKAD------ACNLFYMEYAAHHHHHH
2WZ8 Chain:A ((45-148))
-------------------------------------------------SNNYLQFNNVYVPQAGTYRMVVQFANAEVFNVVDRYCSISVNGGPEKGHYFFNTRGWNTYRTDIIDVYLNAGNNTIRFYNGTSGSYAPNIDKIAIAA------
General information:
TITO was launched using:
RESULT:
Template:
2WZ8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30708 for 366 contacts (-83.9/contact) +
2D Compatibility (PS) -7126 + (NN) 3140 + (LL) 2136
1D Compatibility (HY) -4400 + (ID) 1000
Total energy: -37958.0 ( -103.71 by residue)
QMean score : 0.206
(partial model without unconserved sides chains):
PDB file :
Tito_2WZ8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WZ8-query.scw
PDB file :
Tito_Scwrl_2WZ8.pdb
: