Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | SSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNG-----------------------QLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN-GQ--LLQTLTGH |
| 4J87 Chain:A ((11-255)) | SSRAKGVAFHPTQPWILTSLHNGRIQLWDYRMGTLLDRFDGHDGPVRGIAFHPTQPIFVSGGDDYKVNVWNYKSRKLLFSLCGHMDYVRVCTFHHEYPWILSCSDDQTIRIWNWQSRNCIAILTGHSHYVMCAAFHPSEDLIVSASLDQTVRVWDISGLRMKNAAPVSMSKEDQKAQAADAIVKFVLEGHDRGVNWCAFHPTLPLILSAGDDRLVKLWRMTASKAWEVDTCRGH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4J87.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -50114 for 1660 contacts (-30.2/contact) +
2D Compatibility (PS) -22907 + (NN) -21954 + (LL) 0
1D Compatibility (HY) -15600 + (ID) 3900
Total energy: -114475.0 ( -68.96 by residue)
QMean score : 0.496
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