Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKPNLRPKLGSSALIAFLSLYSSLVLNYAFFAKVVELHPFNGTGADIFLYTMPVVLFFLSNFVFHVIALPFVHKVLIPLILVISAAVSYQEIFFNIYFNKSMLNNVLQTTAAESARLITPGYVLWIVCLGVLPALAYIAVKVKYRVWYKELLTRLVLAAVSFLCALGIAMLQYQDYASFFRNNKSVTHLIVPSNFIGAGVSKYKDWKRSNIPYTQLDMAVVQNRPAGSLRRFVVLVVGETTRAANWGLNGYSRQTTP---LLAARGDEIVNFPQVRSCGTSTAHSLPCMFSTFD-RTD----YD-E----IKAEHQDNLLDIVQRAGVEVTWLENDSGCKGVCGKVPN-TDVT-----SLNLPEYCRNG-ECLDNILLTKFDEVLNKN-DKDAVLILHTIGSHGPT-----YYERYTEAERK-----FTPTCDTNE-------I----------------NKCTRATLVNTYDNTVLYVDQFIDKVIRKLENRDD-LESVVHYVSDHGESLGENGMYLHAA-PYAIAPSGQTHIPMVMWFSKAFRQHGGIDFQCLKQKAAENEYSH--DHYFSTVLGLMDISNSQTYRKEMDILAACRRPR |
| 3B5Q Chain:A ((15-346)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EKPN-FLIIQCDHLTQRVVGAYGQTQGCTLPIDEVASRG---VIFSNAYVGCPLSQPSRAALWSGMMPHQTNVRSNSSEPVNTRLPENVPTLGSLFSESGYEAVHFGKTHD--M---GSLRGFKHKEPVAKPFTDPEFPVNNDSFLDVGTCEDAVAYLSNPPKEPFICIADFQNPHNICGFIGENAGVHTDRPISGPLPELPDNFDVEDWSNIPTPVQYICCSHRRMTQAAHWNEENYRHYIAAFQHYTKMVSKQVDSVLKALYSTPAGRNTIVVIMADHGDGMASHRMVTKHISFY----DEMTNVPFIFAGPGIKQQ----------KKPVDHLLTQPTLDLLPTLCDLAGIA------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3B5Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -92681 for 2253 contacts (-41.1/contact) +
2D Compatibility (PS) -29894 + (NN) -14533 + (LL) 22792
1D Compatibility (HY) -8400 + (ID) 2150
Total energy: -124866.0 ( -55.42 by residue)
QMean score : 0.194
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