Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQRQPVSSSRILSIGYDPDNRMLEIQFREQGTYQYLGVPERAHQNFMSAVSKGRFFDGVIKGKFLCRKIG
1CEE Chain:B ((16-44))
--------KHVSHVGWDPQNG-F----------DVNNLDPD-LRSLFSR---------------------
General information:
TITO was launched using:
RESULT:
Template:
1CEE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5650 for 129 contacts (-43.8/contact) +
2D Compatibility (PS) -3010 + (NN) -1982 + (LL) 2836
1D Compatibility (HY) -2400 + (ID) 250
Total energy: -10456.0 ( -81.05 by residue)
QMean score : 0.218
(partial model without unconserved sides chains):
PDB file :
Tito_1CEE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1CEE-query.scw
PDB file :
Tito_Scwrl_1CEE.pdb
: