Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAHHHHHHMVAMQSTIPSLTREEIADRMQHNPLVQAYQQEVMHWCKIVYGNSDVLKEKMQEVLQKPSEGEDLSRQVAE-NPTSVHKLAGRNLCGLKTNA-RRQAEEGFMHLCQALDGYTSAVTQAQENIKHVPQAEARRYGQESEQRA |
3D1K Chain:A ((22-89)) | -----------------------------------------------------------------DAIGNDALSRMIVVYPQTKIYFSHWPDVTPGSPNIKAHGKKVMGGIALAVSKIDD-LKTGLMELSEQHA-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3D1K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 7804 for 361 contacts (21.6/contact) +
2D Compatibility (PS) -7187 + (NN) -3150 + (LL) 7432
1D Compatibility (HY) -800 + (ID) 200
Total energy: 3899.0 ( 10.80 by residue)
QMean score : 0.104
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