Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNKLYTTLLIACLAAGFTACNDDDCEDLHLGNLAHYPNVLKGTFPTESQVLELGETLEITPELLNPEGATYSWLVNGKEYSTEPTFSYKIDNPCRADLSCIIKNKYGKVEMSTSFSSNHNFSKGFFYVADGTFNFYDTEKKTAYQDCYASLNAGKTLGIGNYDSANIIHSNGKFYLLVGTSTSNRDHFYIVDAKTL--YYENSAVVGANLSGLTILN-EQYGLVTGD---GIRRIDLKSLNN-VRIKN-ERLLCFYNSIIY-NGKVLSNDTYKDESKVKYYDVNELIAAKEGEAPAVTELD-IIQKQKINFVLAK-DGNVYTLESADNGCNIVKIKNDFTLEKVFANFQPAKGPYHSSPTIGMVASETENIIYLVST-DGAIYKYILGDSDSLKAPFIAAESGVSITAPLQLNQQSGELYVTYTEERKDESKIVVYSKD-GKVLHTVDCGESVPSQILFNN |
3SOV Chain:A ((13-257)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTD--SETNRIEVSNLDGS---------LRKVLFWQELDQPRAIALDPSSGFMYWTDWG-EVPKIERAGMDGSSRFIIINSE-------IYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQA--VV--KGSLPHPFALTLF--EDILYWTDW----STHSILACNKYTGEGLREIHSDIFSPMDIHA-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SOV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -94461 for 1881 contacts (-50.2/contact) +
2D Compatibility (PS) -24954 + (NN) -5852 + (LL) 10192
1D Compatibility (HY) -1200 + (ID) 1650
Total energy: -117925.0 ( -62.69 by residue)
QMean score : 0.165
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