Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFQKKTYAVFLILLLMMFTAACSGSKTSAEKKESETEKSSDIAQVKIKDVS------YTLPSKYDKSTSDD-------QLVLKVNVAVKNTGKDPLNV-D--SMDFTLYQGDTKMSDTDPEDY-SEKLQGSTINADKSVEGNL------FFVVDKGKQYELNYTPES----------------------YGDKKPKSVTFKIDG---------------KDKKILAT---ADKLQDSAKAL-SAYVDVLLFGKDNADFEKITGANKNEIVNDFNESAKDGYLSASGLSSTYAD-----SKALDNIVNGIKEGLSKNSSIQAKTTSISKDEAIVEATV---KPVDASSL----SDRIEDKVKDYYSKNSSASYEEAVKYA--LQVYPEEFKKLGPASSEKTVEVKMKKNDIDQWQLDMDDYRAAELVEAFIKE |
| 1VJ0 Chain:A ((14-379)) | M-GLKAHAM-------VLEKF--NQPLVYKEFEISDIPRGS-ILVEILSAGVCGSDVHMFRGEDPRVPLPIILGHEGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETD--VLKVSEKDDLDVLAMAMCSGATAYHAFDEYPESFAGK-TVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNR----RETS-------------VEERRKAIMDI---THGRGADFILEATGDSRALLEGSELLRRG---GFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVSDTSHFVKTVSITSRNYQLL--SKLITHRLPLKEANKALELMESREALK-VILYPE-------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VJ0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 76255 for 1927 contacts (39.6/contact) +
2D Compatibility (PS) -30184 + (NN) -1489 + (LL) 5836
1D Compatibility (HY) -4800 + (ID) 1950
Total energy: 43668.0 ( 22.66 by residue)
QMean score : 0.215
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