Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
GEEKMTNGQLWKKVKDSLIDSNIISGNENEEITVTYVNKTGYSSSVSAYGNNNDDFSSTPSNFSKLKEIDLKKDNVPSDDFNTTVSGEDSWKTLTSKLKEKGLVTDGQTVTIHCNDKSDNTKSSVSGKVGADLTSGNGTTFKKRFIDKITID
2K5L Chain:A ((23-72))
--------------------------------------------------------------------------------------------ALKRRIMDMGIT-RGCEIYIRKVAPLG---DPIQINVR-----GYELSLRKSAAEMIEV-
General information:
TITO was launched using:
RESULT:
Template:
2K5L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6809 for 291 contacts (-23.4/contact) +
2D Compatibility (PS) -5434 + (NN) -1351 + (LL) 3076
1D Compatibility (HY) -2400 + (ID) 400
Total energy: -13318.0 ( -45.77 by residue)
QMean score : 0.186
(partial model without unconserved sides chains):
PDB file :
Tito_2K5L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2K5L-query.scw
PDB file :
Tito_Scwrl_2K5L.pdb
: