Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MAATASAGAGGIDGKPRTSPKSVKFLFGGLAGMGATVFVQPLDLVK-NRMQLSGEGAKTREYKTSFHALTS---------------ILKAEGLRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGADG--TPPGFLLKAVIGMTAGATGAFVGT--------------PAEVALIRMTADGRLPADQRRGYK-NVFNALIRITREEGVLTLWRGCIPTMARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAA--------SMPVDIAKTR--------IQNMRMIDGKPEYK----NGLDVLF-------KVVRYEGFFSLWKGFTPYYARLGPHTV-LTFIFLEQMNKAYKRLFLSG--- |
| 2QRL Chain:A ((24-394)) | AVTLHLRAETKPLEARAALTPTTVKKLIA----KGFKIYVEDSPQSTFNINEYRQAGAIIVPAGSWKTAPRDRIIIGLKEMPETDTFPLVHEHIQFAHCYKDQAGWQNVLMRFIKGHGTLYDLEFLENDQGRRVAAFGFYAGFAGAALGVRDWAFKQTHSDDEDLPAVSPYPNEKALVKDVTKDYKEALATGARKPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKETSRGGPFDEIPQADIFIN----CIYLSKPIAPFTNMEKLNNPNRRLRTVVDVSADTTNPHNPIPIYTVATVFNKPTVLVPTTAGPKLSVISIDHLPSLLPREASEFFSHDLLPSLELLPQRKTAPVWVRAKKLFDRHCARVKRSSRL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QRL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -111914 for 2347 contacts (-47.7/contact) +
2D Compatibility (PS) -31282 + (NN) 1668 + (LL) 200
1D Compatibility (HY) -400 + (ID) 1950
Total energy: -143678.0 ( -61.22 by residue)
QMean score : 0.075
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