Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQMDNRLPPKKVPGFCSFRYGLSFLVHCCNVIITAQRACLNLTMVVMVNSTDPHGLPNTSTKKLLDNIKNPMYNWSPDIQGIILSSTSYGVIIIQVPVGYFS---GIYSTKKMIGFALCLSSVLSLL-------------IPPAAGIGVAWVVVCRAVQGAAQGIVATAQFEIYVKWAPPLERGRLTSMSTSGFLLGPFIVLLVTGVICES--LGWPMV--FYIFGACGCAVCLLWFVLFYDDPKDHPCISISEKEYITSSLVQQVSSSRQSLPIKAILKSLPVWAISTGSFTFFWSHNIMTLYTPMFINSMLHVNIKENGFLSSLPYLFAWICGNLAGQLSDFFLTRNILSVIAV---RKLFTAAGFLLPAIFGVCLPYLSST--FYSIVIFLILAGATGSFCLGGVFINGLDIAPRYFGFIKACSTLTGMIGGLIASTLTGLILKQDPESAWFKTFILMAAINVTGLIFYLIVATAEIQDWAKEKQHTRL |
| 4QIQ Chain:A ((7-470)) | ----------------SYIFSITLVATLGGLLFGYDTAVISGT--------------VESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGYVPEFVIYRIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDASWLNTDGWRYMFASECIPALLFLMLLYTVPE-----SPRWLMTLATQAVQEIKHSLDRL--LMFGVGVIVIGVMLSIFQQFVGINVVLYYAPEVFKTL------------GASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNA---IRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHF-HNGFSYWIYGCMGVLAALFMWKFVPETKGKTL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QIQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -332646 for 3413 contacts (-97.5/contact) +
2D Compatibility (PS) -40614 + (NN) 3986 + (LL) 2352
1D Compatibility (HY) -30400 + (ID) 3550
Total energy: -400872.0 ( -117.45 by residue)
QMean score : 0.223
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