Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------METVP--PAVDLVLGASACCLACVFTNP----------------------LEVVKTRLQLQGE---------------------------LQARGTYPR-----------PYHGFIASVAAVARAD-GLWGLQKGLAAGLLYQGLMNGVRFYCYSLACQAGLTQQPGGTVVAGAVAGALGAFVGSPAYLIKTQLQAQTVA---AVAVGHQHNHQTVLGALETIWRQQGLLGLWQGVGGAVPRVMVGSAAQLATFASAKAWVQKQQWLPEDSWLVALAGGMISSIAVVVVMTPFDVVSTRLYNQ-PVDTAG--RGQLYGGLTDCMV--------KIWRQEGP-----------LALYKGLG-PAYLRL--GPHTILSMLFWD----ELRKLAGRAQHKGT------------------------- |
| 4Z0V Chain:A ((7-440)) | PPAFTELQLPRYIMAGFPVCPKLSLEFGDPASSLFRWYKEAKPGAAGSSWTETDVEERVYTPSNADIGLRLKLHCTPGDGQRFGHSRELESVCVVEAGPGTCTFDHRHLYTKKVTEDALIRTVSYNILADTYAQTEFSRTVLYPYCAPYALELDYRQNLIQKELTGYN--ADVICLQEVDRAVFSDSLVPALEAFGLEGVFRIKQHEGLATFYRKSKFSLLSQHD-ISFYEALESDPLHKELLEKLVLYPSAQEKVLQRSSVLQVSVLQSTKDSSKRICVANTHLYWHPKGGYIRLIQMAVALAHIRHVSCDLYPGIPVIFCGDFNSTPSTGMYHFVINGSIPEDHEDWASNGEEERCNMSLTHFFKLKSACGEPAYTNYVGGFHGCLDYIFIDLNALEVEQVIPLPSHEEVTTHQALPSVSHPSDHIALVCDLKWK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Z0V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -121856 for 2188 contacts (-55.7/contact) +
2D Compatibility (PS) -29813 + (NN) 19965 + (LL) 364
1D Compatibility (HY) -18400 + (ID) 3300
Total energy: -153040.0 ( -69.95 by residue)
QMean score : 0.004
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