Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------MSSESKEQHNVSPRDSAEGNDSYPSGIHLELQRESSTD----FKQFETNDQCRPYHRILIERQEKSDTNFKEFVIKKLQKNCQCSPAKAKNMILGFLPVLQWLPKYDLKKNILGDVMSGLIVGILLVPQSIAYSLLAGQEPVYGLYTSFFASII--YFLLGTSRHISVGIFGVLCLMIGETVDRELQKAGYDNAHSAPSLGMVSNGSTLLNHTSDRICD--KSCYAIMVGSTVTFIAGVYQVAMGFFQVGFVSV--YLSDALLSGFV-TGASFTILTSQAKYLLGLNLPRTNGVGSLITTWIHVFRNI--------HKTNLCDLITSLLCLLVLLPTKE----------------LNEHFKSKLKAPIPIEL-----VVVV----AATLASHFGKLHENYNSSIAGHIPTG-------FMPPKVPEWNLIPSVAVDAIAISIIGFAITVSLSEMFAKKHGYTVKANQEMYAIGFCNIIPSFFHCFTTSAALAKTLVKESTGCHTQ--LSGVVTALVLLLVLLVIAPLFYSLQKSVLGVITIVNLRGALRKFRDLPKMWSISRMDTVIWFVTMLSSALLSTEIGLLVGVCFSIFCVILRTQKPKSSLLGLVEESEVFESVSAYK----------NLQIKPGIKIFRFVAP-----LYYINKECFKSALYKQTVNPILIKVAWKKAAKRKIKEKVVTLGGIQDEMSVQLSHDPLELHTIVIDCSAIQ----FLDTAGIHTLKEVRRDY--EAIGIQVLLAQCNPTVRDSLTNGEYCKKEEENLLFYSVYEAMAFAEVSKNQKGVCVPNGLSLSSD |
| 3S28 Chain:A ((27-807)) | NEVLALLSRVEAKGKGILQQNQIIAEFEALPEQTRKKLEGGPFFDLLKSTQEAIVLPPWVALAVRPRPGVWEYLRVNLHALVVEELQPAEF-LHFKEELVDGVKNGNFTLELDFEPFNASIPRPTLHKYIGN--------GVDFLNRHLSAKLFHDKESLLPLLKFLRLHSHQGKNLMLSEKIQNLNTLQHTLRKAEEYLAELKSETLYEEFEAKFEEIGLERG---WGDNAERVLDMIRLLLDLLEAPDPCTLETFLGRVPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALEIEMLQRIKQQGLNIKPRILILTRLLPDAVGTTCGERLERVYDSEYCDILRVPFRTEKGIVRKWISRFEVWPYLETYTEDAAVELSKELNGKPDLIIGNYSDGNLVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKLDDKYHFSCQFTADIFAMNHTDFIITSTFQEIAGSKETVGQYESHTAFTL------PGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDVENK-------EHLCVLKD-KKKPILFTMARLDRVKNLSGLVEWYGKNTRLRELA----NLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVHGK-------SGFHIDPYHGDQAADTLADFFTKCKEDPSHWDEISKGGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSN----LDRLEARRYLEMFYALKYRPLAQA---------VPLAQD |
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General information:
TITO was launched using:
| RESULT:
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Template: 3S28.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -354337 for 5664 contacts (-62.6/contact) +
2D Compatibility (PS) -70359 + (NN) 6688 + (LL) 3160
1D Compatibility (HY) -19200 + (ID) 4650
Total energy: -438698.0 ( -77.45 by residue)
QMean score : 0.277
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