Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGPWGEPELLVWRPEAVASEPPVPVGLEVKLGALVLLLVLTLLCSLVPICVLRRPGANHEGSASRQKALSLVSCFAGGVFLATCLLDLLPDYLAAIDEALAALHVTLQFPLQEFILAMGFFLVLVMEQITLAYKEQSGPSPLEETRALLGTVNGGPQHWHDGPGVPQASGAPATPSALRACVLVFSLALHSVFEGLAVGLQRDRARAMELCLALLLHKGILAVSLSLRLLQSHLRAQVVAGCGILFSCMTPLGIGLGAALAESAGPLHQLAQSVLEGMAAGTFLYITFLEILPQELASSEQRILKVILLLAGFALLTGLLFIQI |
| 2NXV Chain:A ((1-249)) | MKPVPTYVQDKDESTLMFSVCSLVRDQAKYDRLLESFERFGFTPDKAEFLAADNRE-GNQFHGFSWHKQMLPRCKGRYVIFCHEDVELVDRGYDDLVAAIEALEEADP--------KWLVAGVAGSPW--------RPLNHSVTAQALHISDVFGNDRRR--------GNVPCRVESLDECFLLMRRLKPVLNSYDMQGFH------------------YYGADLCLQAEFLGGRAYAI-----------------------DFHLHHYGRAI---ADENFHRLRQEMAQKYRRWFPGRILHCVTGRVALGGGWYEAR------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2NXV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -197330 for 2029 contacts (-97.3/contact) +
2D Compatibility (PS) -26384 + (NN) -6013 + (LL) 6352
1D Compatibility (HY) 4000 + (ID) 1350
Total energy: -220725.0 ( -108.79 by residue)
QMean score : 0.190
|
|
|