Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEDSPTMVRVDSPTMVRGENQVSPCQGRRCFP-KALG----------YVTGDMKELANQLKDKPVVLQFIDWILRGISQVVFVNNPVSGILILVGLLVQNPWWALTGWLGTVV-----STLMALLLSQDRSLIASGLYGYNATLVGV--------LMAVFSDKG--DYFWWLLL------PVCAMSMT-----------------CPIFSSALNSM-LSKWDLPVF-------TLPFNMALSMYLSATGH---------------YNPFFPAKLV----IPITTAPNISWSDLSALELLKS-------IPVGVGQIYGCDNPWTGGIFLGAILLSSPLMCLHAAIGSLLGIAAGLSLSAPFEDIYFGLWGFNSSLACIAMGGMFMALTWQTHL-LALGCALFTAYL--------GVGMANFMAEVGLPACTWPFCLATLLFLIMTTKNSNIYKMPLSKVTYPEENRIFYLQAKKRMVESPL---------------------------------- |
| 4PQG Chain:A ((6-511)) | -HHHMTIYNIN-LGIGWASSGVEYAQAYRAGVFRKLNLSSKFIFTDMILADNIQHLTANIGFD---DNQVIWLYNHFTDIKIAPTSVTVDDVLAYFGGEESHREKNGKVLRVFFFDQDKFVTCYLVDENKDLVQHAEYVFKGNLIRKDYFSYTRYCSEYFAPKDNVAVLYQRTFYNEDGTPVYDILMNQGKEEVYHFKDKIFYGKQAFVRAFMKSLNLNKSDLVILDRETGIGQVVFEEAQTAHLAVVVHAEHYSENATNEDYILWNNYYDYQFTNADKVDFFIVSTDRQNEVLQEQFAKYTQHQPKIVTIPVGSIDSLTDSSQGRKPFSLITASRLAKEKHIDWLVKAVIEAHKELPELTFDIYGSGGEDSLLREIIANHQAEDYIQLKGHAELSQIYSQYEVYLTASTSEGFGLTLMEAIG-SGLPLIGFDVPYGNQTFI---EDGQNGYLIPSSSDHVEDQIKQAYAAKICQLYQENRLEAMRAYSYQIAEGFLTKEILEKWKKTVEEVLHD |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PQG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -249489 for 2733 contacts (-91.3/contact) +
2D Compatibility (PS) -39607 + (NN) 97 + (LL) 992
1D Compatibility (HY) -11600 + (ID) 3000
Total energy: -302607.0 ( -110.72 by residue)
QMean score : 0.155
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