Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKLKKILGLLGLALAAAFVLTACGQKNDKNTLTVGVMTMTDSDKERWDKIEELLKKENIKLKFKEFTDYSQPNKALKNGEIDINSFQHYNFLNNWNKENKGDLVTVAETYISPINLFSGTENGKAKYSSAKEIPNGGQIAIPNDATNESRALYVLQDAGLIKLNVSGDELATVKNIKSNPKNLDIKEVDASQTARNLASVDAAVVNNSYAVPAKIDF-KTSLYKEKVNEGSKQWINIIAAQKNWKKSKKAAAIKKLIKAYHTDAVKKVIKKTAK-GVDEPVW |
1XS5 Chain:A ((2-240)) | ----------------------------DETVGVGVLSE--PHARLLEIAKEEVKKQHIELRIVEFTNYVALNEAVMRGDILMNFFQHVPHMQQFNQEHNGDLVSVGNVHVEPLALYS------RTYRHVSDFPAGAVIAIPNDSSNEARALRLLEAAGFIRMRAGSGLFATVEDVQQNVRNVVLQEVESALLPRVFDQVDGAVINGNYAIMAGLSARRDGLAVEPDA---SAYANVLVVKRG---NEADARVQAVLRALCGGRVRTYLKERYKGGEVAPA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XS5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -43771 for 2001 contacts (-21.9/contact) +
2D Compatibility (PS) -24744 + (NN) -4770 + (LL) 2616
1D Compatibility (HY) -18400 + (ID) 3750
Total energy: -92819.0 ( -46.39 by residue)
QMean score : 0.413
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