Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKRLLTVAAFALAGCVTVVAQDKKKEFKMPTGYAGITHEMSEFYEPVPPVVTPGTDLKGGGFTAPSD--AIVLFDGKDLSAWESVKG--GAAEWDVHDGVFTVNKK-------KGDIQTKQKFNDFQMHIEWQVPTNITGESQSRGNSGIFLQG-----------MYEVQVLDCYNNPTYVN-----GQTGSIYKQSIPLANAMRKPGEWNVYDIIYTAPTFKEDGSYRTHPTVTVIQNGVVLQNHTT-------ILGTTEWI-------GFP-QV------KKHGAGPIILQSHGDPSEPISFRNIWIREL |
| 3H3L Chain:A ((15-241)) | --------------------------------------------------------------DGIPTGGEWITMFDGKTLNGWRGYCRQDVPLGWVVEDGSITYKGSDNKADTGFGDLIYDKKFKNFVFEIEWKIDK--------AGNSGIFYTAQEIEGTPIYYSSPEYQLLDNENMPDAWEGCDGNRQAGAVYDMIMPDPQPVKPYGNWNKTRIVVY------------NQRVIHYMNDVKILEFQFGTPVWRALVDHSKFSKFSTSPEKCPEAYDLMLQCGK-QPGYIGMQDHGY---GVCFRNIRIKEL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3H3L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -90765 for 1371 contacts (-66.2/contact) +
2D Compatibility (PS) -19514 + (NN) -7275 + (LL) 4064
1D Compatibility (HY) -12800 + (ID) 2900
Total energy: -129190.0 ( -94.23 by residue)
QMean score : 0.301
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