Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-----MVDLKIDVSDDEEAEKIIREIRE--QWPKATVTRTNG------D---------------IKLDAQTEKEAEKMEKAVKKVKPNATIRKTGGSLEHHHHHH
1K2Y Chain:X ((368-463))
PSDISTPEINITVTE-DSKFAIIEALQRDAQWGEGNITTLDGVRVDYPKGWGLVRASNTTPVLVLRFEADTEEELERIKTVFRNQ-----LKAVDSSLPVPF---
General information:
TITO was launched using:
RESULT:
Template:
1K2Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4198 for 348 contacts (-12.1/contact) +
2D Compatibility (PS) -7574 + (NN) -3594 + (LL) 96
1D Compatibility (HY) -4400 + (ID) 750
Total energy: -20420.0 ( -58.68 by residue)
QMean score : 0.536
(partial model without unconserved sides chains):
PDB file :
Tito_1K2Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1K2Y-query.scw
PDB file :
Tito_Scwrl_1K2Y.pdb
: