Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MIFLAI-----LDLKSLVLNAINY-WGPKNNNGIQGGDFGYPISEKQIDTSIITSTH---PRLIPHDLTIPQNLETIFTTTQVLTNNTDLQQSQTVSFAKKTTTTTSTSTTNGW-TEGGKISDTLEEKVS--------------VSIPFIGEGGGKNSTTI---EANFAHNSSTTTFQQASTDIEWNISQPVLVPPRKQVVATLVIMGGNFTIPMDLMTTIDSTEHYSGYPILTWISSPDNSYNGPFMSWYFANWPNLPSGFGPLNSDNTVTYTGSVVSQVSAGVYATVRFDQYDIHNLRTIEK--TWYARHATLHNG-KKISINNVTEMAPTSP-----IKTN- |
| 1QAS Chain:A ((205-756)) | YKMLTQRAEIDRAFEEAAGSAETLSVERLVTFLQHQQREEEAGPALALSLIERYEPSETAKAQRQMTKDGFLMYLLSADGNAFSLAHRRVYQDMDQPLSHYLVSSSHNTYLLEDQLTGPSSTEAYIRALCKGCRCLELDCWDGPNQEPIIYHGYTFTSKILFCDVLRAIRDYAFKASPYPVILSLENHCSLEQQRVMARHLRAILGPILLDQPLDGVTTSLPSPEQLKGKILLKGKKLGGKLVPELSDMIIYCKSVHFGGFSSPGTSGQAFYEMASFSESRALRLLQESGNGFVRHNVSCLSRIYPAGWRTDSSNYSPVEMWNGGCQIVALNFQTPGPEMDVYLGCFQDNGGCGYVLKPAFLRDPNTT----FNSRALTQGP---WWRPERLRVRIISGQQLPKVNIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNP------------RWDMEFEFEVTVPDLALVRFMVEDYDSSSKNDFIGQSTIPWNSLKQGYRHVHLLSKNGDQHPSATLFVKISIQD |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QAS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -14316 for 2016 contacts (-7.1/contact) +
2D Compatibility (PS) -30479 + (NN) -7904 + (LL) 696
1D Compatibility (HY) -2400 + (ID) 1600
Total energy: -56003.0 ( -27.78 by residue)
QMean score : 0.181
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