Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSAFSRFTPLIQSLPASVPFVGPEALERQHGRK--IAARIGANESGFGPAPSVLLAIRQAAGDTWKYADPENHDLKQALARHLGTSPANIAIGEGIDGLLGQIVRLVVEAGAPVVTSLGGYPTFNYHVAGHGGRLVTVPYAD-DREDLEGL-LAAVGRENAPLVYLANPDNPMGSWWPAERVVAFAQALPE-TTLLVLDEAYCETAPRDALPPIESLIDKPNVIRARTFSKAYGLAGARIGYTL-STPGTAQAFDKIRNHFGMSRIGVAAAIAALADQDYLKEVTLKIANSRQRIGRIAADS-GLAPLPSATNFVAVDCGKDASYARAIVDRLMSDHGIFIRMPGVA-PL-NRCIRISTAPDAEMDLLAAALPEVIRSLAAT |
| 1LC5 Chain:A ((3-357)) | -------------LFNTAHGGNIREPATVLGISPDQLLDFSANINPLGMPVSVKRALIDNLDCIERYPDADYFHLHQALARHHQVPASWILAGNGETESIFTVASGLKP--RRAMIVTPGFAEYGRALAQSGCEIRRWSLREADGWQLTDAILEALT-PDLDCLFLCTPNNPTGLLPERPLLQAIADRCKSLNINLILDEAFIDFIPHET-GFIPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDDAAMARMRRQQMPWSVNALAALAGEVALQDSAWQQATWHWLREEGARFYQALCQLPLLTVYPGRANYLLLRCEREDI---D-LQRRLLTQRILIRSCANYPGLDSRYYRVAIRSAAQNERLLAALRNVL------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LC5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -182348 for 2951 contacts (-61.8/contact) +
2D Compatibility (PS) -38258 + (NN) -27354 + (LL) 2420
1D Compatibility (HY) -14000 + (ID) 3700
Total energy: -263240.0 ( -89.20 by residue)
QMean score : 0.488
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