Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
SDTRKAIDTISNLLKIKP--------IYIESMLQEMGPR-----QTQMFIRSTS----N-GSAEEVRKAAYLVFIYHTFIKN-PSDENVELWRNTLIRAQISPILAAEHTDAALFYFAELDLDAFELAQFRRHYNLHFNPEPGTLLH
3ZYQ Chain:A ((42-144))
-QAKYAVNSIKKKVNDKNPHVALYALEVMESVVKNCGQTVHDEVANKQTMEELKDLLKRQVEVNVRNKILYLIQAWAHAFRNEPKYKVVQDTYQIMKVEGHVFP-------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3ZYQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34731 for 465 contacts (-74.7/contact) +
2D Compatibility (PS) -9089 + (NN) -6528 + (LL) 3408
1D Compatibility (HY) -800 + (ID) 600
Total energy: -48340.0 ( -103.96 by residue)
QMean score : 0.190
(partial model without unconserved sides chains):
PDB file :
Tito_3ZYQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZYQ-query.scw
PDB file :
Tito_Scwrl_3ZYQ.pdb
: