Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKLYTTLLIACLAAGFTACNDDDCEDLHLGNLAHYPNVLKGTFPTESQVLELGETLEITPELLNPEGATYSWLVNGKEYSTEPTFSYKIDNPCRADLSCIIKNKYGKVEMSTSFSSNHNFSKGFFYVADGTFNFYDTEKKTAYQDCYASLNAGKTLGIGNYDSANIIHS-NGKFYLLVGTSTSNRDHFYIVDAKTLYYENSAV---VGANLSGLTILNEQYGLVTG---DGIRRIDLKSLNNVRIKN--ERLLCFYNSIIYNGKVLSNDTYKDESKVKYYDVNELIAAKEGEAPAVTELDI--IQKQKINFVLAKDGNVYTLESADNGCNIVKIKNDFTLEKVFANFQPAKGPYHSSPTIGMVASETENIIYLVST-DGAIYKYILGDSDSLKAPFIAAESGVSITAPLQLNQQSGELYVTYTEERKDESKIVVYSKDGKVLH-TVDCGESVPSQILFNN |
| 2QC5 Chain:A ((22-279)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------PYGITSSEDGKVWFTQHK----ANKISSLDQSG-R-IKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLS-KKGGFTEYPLPQPDSGPYGITEGLNGDIWFTQ--LNGDRIGKLTADG----------TIYEYDLPNKGSYPAFITLGSDNALWFTENQ--NNSIGRITNTGKLEEYPLPTN-------AAAPVGITSGND-GALWFVEIMGNKIGRITT-TGEISEY---DIPTPNARPHAITAGKN-SEIWFTEW----GANQIGRITNDNTIQEYQLQTENAEPHGITF-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QC5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -96312 for 1977 contacts (-48.7/contact) +
2D Compatibility (PS) -27394 + (NN) -9820 + (LL) 9280
1D Compatibility (HY) -1600 + (ID) 1600
Total energy: -127446.0 ( -64.46 by residue)
QMean score : 0.207
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