Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
GEEKMTNGQLWKKVKDSLIDSNIISGN--ENEEITVTYVNKTGY-SSSVSAYGNNNDD--------FSSTPSNFSKLKEIDLKKDNVPSDDFNTTVSGEDSWKTLTSKLKEKGLVTDGQTVTIHCNDKSDNTKSSVSGKVGADLTSGNGTTFKKRFIDKITID
1EU3 Chain:A ((127-206))
--TTVTAQEIDLKVRKFLIAQHQLYSSGSSYKSGRLVFHTNDNSDKYSFDLFYVGYRDKESIFKVYKDNKSFNIDKIGHLDI---------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1EU3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6443 for 367 contacts (-17.6/contact) +
2D Compatibility (PS) -7503 + (NN) -4154 + (LL) 2464
1D Compatibility (HY) -3200 + (ID) 500
Total energy: -19336.0 ( -52.69 by residue)
QMean score : 0.228
(partial model without unconserved sides chains):
PDB file :
Tito_1EU3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EU3-query.scw
PDB file :
Tito_Scwrl_1EU3.pdb
: