Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MALDFLAGCAGGVAGVLVGHPFDTVKVRL---QVQSVEKPQYRGTLHCFKSI----IKQESVLGL--------------------YKGLGSPLMGLTFINALVFGVQGNTLR---ALGHDSPLNQFLAGAAAGAIQCVICCPMELAKTRLQ-LQDAGPARTYKGSLDCLAQIYGHEGLRGVNRGMVSTLLRETPSFG-----VYFL---TYDALTRALGCEPGDRLLVPKLLLAGGTSGIVSWLSTYPVDVVKSRLQADGLRGAPRYRGILDCVHQSYRAEGWR----------VFTRGLASTLL----RAFPVNAATFATVTVVLTYARGEEAGPEGEAVPAAPAGPALAQPSSL |
| 3J7W Chain:A ((2-344)) | ASMTGGQQMGTNQGKGVVAAGDKLALFLKVFGGEVLTAFARTSVTTSRHMVRSISSGKSAQFPVLGRTQAAYLAPGENLDDKRKDIKHTEKVITIDGLLTADVLIYDIEDAMNHYDVRSEYTSQLGESLAMAADGAVLAEIAGLCNVESKYNENIEGLGTATVIETTQNKAALTDQVALGKEIIAALTKARAALTKNYVPAADRVFYCDPDSYSAILAALMPNAANY----AALIDPEKGSIRNVMGFEVVEV--PHLTAGGAGTAREGTTGQKHVFPANKGEGNVKVAKDNVIGLFMHRSAVGTVKLRDLALERARRANFQADQIIAKYAMGHG-GLRPEA-----AGAVVFKV--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3J7W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -56119 for 1837 contacts (-30.5/contact) +
2D Compatibility (PS) -29709 + (NN) 5274 + (LL) 1124
1D Compatibility (HY) -1600 + (ID) 2800
Total energy: -83830.0 ( -45.63 by residue)
QMean score : 0.018
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