Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAFQDLLGHAGDLWRFQILQTVFLSIFAVATYLHFMLENFTAFIPGHRCWVHILDNDTVSDNDTGALSQDALLRISIPLDSNMRPEKCRRFVHPQWQLLHLNGTFPNTSDADMEPCVDGWVYDRISFSSTIVTE-WDLVCDSQSLTSVAKFVFMAGMMVGGILGGHLSDRFGRRFVLRWC---YLQVAIVGTCAALAPT-FLIYCSLRFLSGIAAMS----LITNTIMLIAEWATHRFQAMGITLGMCPSGIAFMTLAGLAFAIRD--WHILQLVVSVPYFVIFLTSSWLLESARWLIINNKPEEGLKELRKAAHRSGMKNARDTLTLEILKSTMKKELEAAQKKKPSLCEMLHMPNICKRISLLSFTRFANFMAYFGLNLHVQH------LGN-NVFLLQTLFGAVILLANCVAPWALKYMNRRASQMLLMFLLAICLLAIIFVPQEMQTLREVLATLGLGASALANTLAFAHGNEVIPTIIRARAMGIN-ATFANIAGALAPLMMI-LS-VYSPPLPWIIYGVFPFISGFAFLLLPETRNKPLFDTIQDEKNERKDPREPKQEDPRVEVTQF |
| 2CFQ Chain:A ((29-394)) | ------------------------------------------------------------------------------------------------------------------------------FFPIWLHDINHI---SKSDTGIIFAAISLFSLLFQPLFGLLSDKLGLRKYLLWIITGMLVMFAPFFIFIFGPLLQYNILVGSIVGGIYLGFCFNAGAPAVEAFIEKVSR--RSNFEFGRARMFGCVGWALGASIVGIMFTINNQFVFWLGSGCALILAVLLFFAKTDAPSS--A-T-VANAV--------GA------------------NH---SAFSLKLALELFRQPKLWFLSLYVIGVSCTYDVFDQQFANFFTSFFATGEQGTRVFGYVTTMGELLNASIMFFAPLIINRIGGKNALLLAGTIMSVRIIGSSFATSA--LEVVILKTLHMFEVPFLLVGCFKYITSQFEVRFSATIYLVCFCFFKQLAMIFMSVLAGNMYESIGFQGAYLVLGLVALGFTLISVFTLSGPGPLSLLRRQVNEVA------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2CFQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -266759 for 2662 contacts (-100.2/contact) +
2D Compatibility (PS) -35446 + (NN) -5283 + (LL) 13612
1D Compatibility (HY) -13600 + (ID) 1850
Total energy: -309326.0 ( -116.20 by residue)
QMean score : 0.215
|
|
|