Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAFEELLSQVGGLGRFQMLHLVFILPS-LMLLIPHILLENFAAAIPGHRCWVHMLDNNTGSGNETGILSEDALLRISIPLDSNLRPEKCRRFVHPQWQLLHLNG-TIHSTSEADTEPCVDGWVYDQSYFPSTIVTKWDLVCDYQSLKSVVQFLLLTGMLVGGIIGGHVSDRFGRRFILR-WCLLQLAITDTCAAFAPTFPVYCVLRFLAGFSSMIIISNNSLPITEWIRPNSKALVVILSSGALSIGQIILGGLAYVFRDWQTLHVVASVPF---FVFFLLSRWLVESARWLIITNKLDEGLKALRKVARTNGIKN-AEETLNIEVVRSTMQEELDAAQT-----KTTVCDLFRNP--SMRKRICILVFLRFANTIPFYGT-MVNLQHVGSNIFLLQVLYGAVALIVRCLALLTLNHMGRRISQILFMFLVGLSILANTFVPKEMQT-LRVALACLGIGCSAATFSSVAVHFIELIPTVLRARASGIDLTASRIGAALAPLLMTLTVFFTTLPWIIYGIFPIIGGLIVFLLPETKNLPLPDTIKDVENQKKNLKEKA |
3OH8 Chain:A ((2-513)) | --------------SLTTSHFIPFPREMVWDWHTR----------------------------------KGAVARLTPPFIPLNPITQAERLADGTTIFSLPAGLKWVARHDLSGFLNGSRFTDVCLTAPVKALANWRHVHNFVDQDG------------GTLITDSVSTRLPASTLTGMFAYRQTQLIEDLKFLSRTST------LFDGSPLTVAITGSR-------GLVGRALTAQLQTGGHEVIQLVRKEPKPGKRFWDPLNPASDLLDGADVLVHLAGEF-NDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRGDEILTEESESGDDFLAEVCRDWEHATAPASDAGKRVAFIRTGVALSGRGGMLPLLKTLFSG--------GKFGDGTSWFSWIAIDDLTDIYYRAIVDAQISGPINAVAPNPVSNADMTKILA---TQGAEELALASQRT-------APAALENLSHTFRYTDIGAAIAHELGYEQLADFAQQQEIEANLE---------DPEEVEQSILSSILNFRRKRNDLEHHH |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OH8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -189325 for 3444 contacts (-55.0/contact) +
2D Compatibility (PS) -43160 + (NN) 11228 + (LL) 9372
1D Compatibility (HY) 30800 + (ID) 1400
Total energy: -182485.0 ( -52.99 by residue)
QMean score : 0.066
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