Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVKLLVAKILCMVGVFFFMLLGSLLPVKIIETDFEKAHRSKKILSLCNTFGGGVFLATCFNALLPAVREKLQKVLSLGHISTDYPLAETILLLGFFMTVFLEQLILTFRKEKPSFIDLETFNAGSDVGSDSEYESPFMGGARGHALYVEPHGHGPSLSVQGLSRASPVRLLSLAFALSAHSVFEGLALGLQEEGEKVVSLFVGVAVHETLVAVALGISMARSAMPLRDAAKLAVTVSAMIPLGIGLGLGIESAQGVPGSVASVLLQGLAGGTFLFITFLEILAKELEEKSDRLLKVLFLVLGYTVLAGMVFLKW |
| 2QV6 Chain:A ((1-253)) | MIQITVIQIDN-----YGPWTVTPNPRRESDLQALQSRLYADLNLMFGAHKGLVFYTR--FDNLIAITNGIDLITHKRIQESIRNRYPFTVSMVIASAETPYEAQKLATETLQEYGSAQD------ENRKEVLDVANELVVDGYVQIAHIDI-------NNITGTLTDIVSAYDTYLNVNKVKLALMEELLKYNALLFFI-----GGDNFMAPS-------NGMSEEDFLDIFNRINKKYKIELKAGIGIGRTAEDASNLADIGLEKIRGKL---------VDKNVCTLKQDDF-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QV6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -106190 for 2034 contacts (-52.2/contact) +
2D Compatibility (PS) -26244 + (NN) -260 + (LL) 5484
1D Compatibility (HY) 800 + (ID) 1200
Total energy: -127610.0 ( -62.74 by residue)
QMean score : 0.168
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