Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRPVFILGIILLLVGCKQRDERVLMVDEQGSFAVGGTVLVDSLGHTFHGDHAYVFYQKPVGARKY-PLVFAHGVGQFSKTWETTPDGREGFQNIFLRRRFCVYLVDQPRRGNAGRGTESVTISPAFDEEVWFNRFRVGIWPDYFEGVQFKRDKETLDQYFRQMTPTIGTTDFEVYSDAYAA---LFDKIG--PGVFITHSQGGPVGWNTLLKTRNIKAIASYEPGGAVPFPEGQLPEEAKFITLSKKMEGIEVPMSVFMEYTKVPIVIYYGDNLPETDERPELYEWTRRLRLMKIWAKMLNDQGGDVTVIHLPEVGLHGNTHFPMSDLNNIEVADLLSEWLHTKALD |
| 1JFR Chain:A ((39-229)) | -------------------------------------------------GGGTIYYPTSTADGTFGAVVISPGFTAYQSSIA-------WLGPRLASQGFVVFTIDTNTTLDQPD------------SR-----------------------G----------------RQLLSALDYLTQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKSRTSLKAAIPLTGWNTD----------------------------KTWPELRTPTLVVGADGDTVAPVA---T-------HSKPFYESLPGS-LDKAYLELRG-----ASHFTPNTS-DTTIAKYSISWLKR---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JFR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -117636 for 1645 contacts (-71.5/contact) +
2D Compatibility (PS) -19965 + (NN) -9257 + (LL) 9344
1D Compatibility (HY) -3600 + (ID) 1200
Total energy: -142314.0 ( -86.51 by residue)
QMean score : 0.266
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