Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKRALSLLLALCLCLSLMPAASASVVESTVQVGPYTFEIWFDGT-ATLTRYDESLAGSTYADIPASVTDENGQEYPVTVIGEKAFEETNITGVTVPDSVISIGRLAFAYCNSLSDVKLSENLIYINELAFASCDALKEITIPASVEKMD-NPFRWSNALDTVYMEGMVAPE
4FS7 Chain:A ((65-218))
---------AAFQGCRK---VTEIKIPSTVREIGEFAFENCSKLEIINIPDSVKMIGRCTFSGCYA-LKSIL-LPLMLKSIGVEAFKGCDFKEITIPEGVTVIGDEAFATCESLEYVSLPDSMETLHNGLFSGCGKLKSIKLPRNLKIIRDYCFAECILLENMEFPNS----
General information:
TITO was launched using:
RESULT:
Template:
4FS7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -91606 for 1161 contacts (-78.9/contact) +
2D Compatibility (PS) -15449 + (NN) 1152 + (LL) 1424
1D Compatibility (HY) -8000 + (ID) 1600
Total energy: -114079.0 ( -98.26 by residue)
QMean score : 0.286
(partial model without unconserved sides chains):
PDB file :
Tito_4FS7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4FS7-query.scw
PDB file :
Tito_Scwrl_4FS7.pdb
: