Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIMKKKILAYALSALTCGLFTSCSDWLDINHDPNTAEKVDPGYLFNYVAVNWAGTRTGGDFYIPLSMSSQCQVDGGLDYGGWDESVYT-ISPYSTGNTWKHYYSVGGNNLMLAIKNAEEADPVNHNAIAQCKILLAEHMYEATMLWGDIPFTESWNGT---IKYPKFDSQESVLNGVLSLLDEALQIMDLNDANAIDEYDIYYKGDMNKWMTLAKSLKFRTLMVMVDKDPSKATAIGTLLQAG-----GMVSSASDNLVFPYSAEPGNQNPKYELIELVGGTQILFFASNYMLKPMQERNDPRIPCYFEPG-----------ADGVYRGLGNREPAVTDDK--DNMLSSVVSSYL--FRKDAPELIYSCQEQLLLEAEAYARGLGVAQNLSKANELYKKGIREACAFYGV---------AEADIDTYVTGLPELTAL--TQEKALYEIHMQQWIDLMDR-P-FEEFVQWRRSGTAGNEVPTLQVPEDATSKELIRRWEYSPEEMTANINAPK--------ESPKIWEKLWFDL |
| 4LER Chain:A ((13-469)) | --------------------------------------TNPSLLLTGVAYSAFNQTSSDA----CH---AAKMLILTSG--ESKYQVYKWTRG-----DFDYY-SNLRDVTKMSEEAGE----GSAYQALAHFFRANYFYQLTLDFGSIPYTDALKAETDANYQPAYDSQEVVLAGILKELEEADKMLEGSDE--IISGDIIYNGNLVNWRKLINAYRLRILMSLSGKEKV-GDIDVKSEFSKIVADGPLMESLSDNGQLIYLDQQDNRYPYFNDS----DFGSGRFMDSTYIAELATRQDPRLFAVATQTPNAEKAGKAINDFSSYDGGDPAVPYSLVNDKAVAGNCSKPAPRYYQTPTNEPMVLLGYVEQQLILAEAVVRGWIQ----GDDKIYYESAVKASFEFYQKYAVSVADYLTQDAAAEYLRNDKVAYSSSLSTDEKIERIIMQKYLPTFLQGSVWLPYYEALRTGYPDFRRA----A----GVSLPYRWMYPQDEYNNNATHVEAALNEQFGGSDKTSDKPWWLQ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4LER.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -58854 for 3442 contacts (-17.1/contact) +
2D Compatibility (PS) -43527 + (NN) -19373 + (LL) 4316
1D Compatibility (HY) -7600 + (ID) 4200
Total energy: -129238.0 ( -37.55 by residue)
QMean score : 0.284
|
|
|