Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVDLKIDVSDDEEAEKIIREIREQWP------KATVTRTNGDIKLDAQTEKEAEKMEKAVKKVKPNATIRKTGGSLEHHHHHH
1CTF Chain:? ((7-74))
EFDVILK-AAGANKVAVIKAVRGATGLGLKEAKDLVESAPAALK-EGVSKDDAEALKKALEEAGAEVEVK-------------
General information:
TITO was launched using:
RESULT:
Template:
1CTF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 12344 for 438 contacts (28.2/contact) +
2D Compatibility (PS) -6910 + (NN) -6847 + (LL) 656
1D Compatibility (HY) -3200 + (ID) 500
Total energy: -4457.0 ( -10.18 by residue)
QMean score : 0.414
(partial model without unconserved sides chains):
PDB file :
Tito_1CTF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1CTF-query.scw
PDB file :
Tito_Scwrl_1CTF.pdb
: