Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
1JQ0 Chain:A ((4-81))
---------------------------------LAGIVQQQQQLLDLVTRQQELLRLTVWGIKNLQT-----------------------------------------------GGWQEWKRKVDFLEENITALLEEAQIQQEKNMYELQK--
General information:
TITO was launched using:
RESULT:
Template:
1JQ0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 6418 for 346 contacts (18.5/contact) +
2D Compatibility (PS) -7520 + (NN) -1097 + (LL) 5368
1D Compatibility (HY) -6000 + (ID) 1800
Total energy: -4631.0 ( -13.38 by residue)
QMean score : 0.174
(partial model without unconserved sides chains):
PDB file :
Tito_1JQ0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JQ0-query.scw
PDB file :
Tito_Scwrl_1JQ0.pdb
: